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Intron Name: Anas_platyrhynchos_platyrhynchos_3_60627957_60629289_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

60627957 - 60629289

Intron Length:

1333

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATCTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTGTATTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAC

U12 Branch Point Sequence:

TTTTTCCTAACA

Flanking Amino Acid:

LFTQTIVPGQILFVPETSAA

Intron Amino Acid Position:

165

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.8

0.89

0.9

84.2

33.9

Major BPS

86.5

0.91

0.8

77.4

37.4

Major PPT

82.2

0.73

0.9

34.8

Minor 5ss

39.5

-1.2

3.2

58.6

45.9

Minor BPS

75.9

0.81

1.6

87.87

29.2

Associated Gene:

Gene:

NCOA7

Ensembl Gene ID:

ENSAPLG00000002790

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002869

60588877 - 60654986

66110

ENSAPLT00000025921

60626085 - 60654986

28902