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Intron Name: Anas_platyrhynchos_platyrhynchos_3_60629392_60630435_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

60629392 - 60630435

Intron Length:

1044

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAAGTCAA

5'SS Class:

major

3'SS Sequence:

TTTCTTGTTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGCAC

U12 Branch Point Sequence:

TTGCACTGAGCT

Flanking Amino Acid:

SSDAEYDKLPDADLARKAFK

Intron Amino Acid Position:

199

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.9

0.56

1.1

67.5

39.4

Major BPS

65.1

0.38

1.4

77.4

37.4

Major PPT

0.63

82.8

32.6

Minor 5ss

36.4

-1.5

51.1

45.2

Minor BPS

49.1

0.02

1.9

71.96

44.1

Associated Gene:

Gene:

NCOA7

Ensembl Gene ID:

ENSAPLG00000002790

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002869

60588877 - 60654986

66110

ENSAPLT00000025921

60626085 - 60654986

28902