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Intron Name: Anas_platyrhynchos_platyrhynchos_3_60630562_60632917_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

60630562 - 60632917

Intron Length:

2356

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTGGA

5'SS Class:

strong_major

3'SS Sequence:

TCTTCTGTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTAAC

U12 Branch Point Sequence:

GATATGTTAACT

Flanking Amino Acid:

MNCRYFTDGKGVVGGVMIVT

Intron Amino Acid Position:

241

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.9

0.82

72.4

39.5

Major BPS

74.5

0.61

1.1

75.6

36.6

Major PPT

85.1

0.79

0.8

80.1

31.8

Minor 5ss

30.7

-2.2

3.4

40.4

45.8

Minor BPS

55.3

0.25

2.1

74.48

41.9

Associated Gene:

Gene:

NCOA7

Ensembl Gene ID:

ENSAPLG00000002790

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025921

60626085 - 60654986

28902

ENSAPLT00000002869

60588877 - 60654986

66110