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Intron Name: Anas_platyrhynchos_platyrhynchos_3_60635615_60637162_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

60635615 - 60637162

Intron Length:

1548

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTCTC

5'SS Class:

strong_major

3'SS Sequence:

GTCTCTTGTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTAAA

U12 Branch Point Sequence:

TGTCCTGTAAAC

Flanking Amino Acid:

LLQKIQVPIEDMLPSKEEKS

Intron Amino Acid Position:

657

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

76.2

39.9

Major BPS

62.9

0.32

1.2

65.3

38.6

Major PPT

78.1

0.63

0.9

76.4

37.7

Minor 5ss

37.4

-1.4

3.3

52.4

44.8

Minor BPS

49.5

-0

2.1

65.89

39.4

Associated Gene:

Gene:

NCOA7

Ensembl Gene ID:

ENSAPLG00000002790

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025921

60626085 - 60654986

28902

ENSAPLT00000002869

60588877 - 60654986

66110