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Intron Name: Anas_platyrhynchos_platyrhynchos_3_60637332_60647105_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

60637332 - 60647105

Intron Length:

9774

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCTAC

5'SS Class:

strong_major

3'SS Sequence:

TTTCTGTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CACTGAA

U12 Branch Point Sequence:

TTTCTGTTTACA

Flanking Amino Acid:

PEYWFAVPRERVDHLYTFFV

Intron Amino Acid Position:

713

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.8

0.94

0.9

78.4

32.4

Major BPS

0.3

34.1

Major PPT

88.9

0.88

0.7

83.5

31.6

Minor 5ss

44.1

-0.6

2.9

58.3

46.6

Minor BPS

49.8

-0

2.3

72.36

39.3

Associated Gene:

Gene:

NCOA7

Ensembl Gene ID:

ENSAPLG00000002790

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025921

60626085 - 60654986

28902

ENSAPLT00000002869

60588877 - 60654986

66110