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Intron Name: Anas_platyrhynchos_platyrhynchos_3_60652220_60652749_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

60652220 - 60652749

Intron Length:

530

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGAGT

5'SS Class:

strong_major

3'SS Sequence:

TTTATTCTGGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

AATCCTTTTATT

Flanking Amino Acid:

LLVIKDMDNQIFGAYATHPF

Intron Amino Acid Position:

856

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.97

0.8

82.5

Major BPS

81.8

0.79

1.1

34.5

Major PPT

80.1

0.68

77.4

36.8

Minor 5ss

-1.8

3.3

48.8

Minor BPS

0.33

1.6

72.84

38.3

Associated Gene:

Gene:

NCOA7

Ensembl Gene ID:

ENSAPLG00000002790

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025921

60626085 - 60654986

28902

ENSAPLT00000002869

60588877 - 60654986

66110