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Intron Name: Anas_platyrhynchos_platyrhynchos_3_60653575_60654463_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

60653575 - 60654463

Intron Length:

889

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGCAAA

5'SS Class:

major

3'SS Sequence:

GCTTCCTTTCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACCTGAT

U12 Branch Point Sequence:

ATGACCTGAAAC

Flanking Amino Acid:

DMTSLELGGGGGRFGLWLDA

Intron Amino Acid Position:

912

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.2

0.64

70.2

37.7

Major BPS

0.5

59.3

39.1

Major PPT

77.8

0.63

0.8

69.5

36.8

Minor 5ss

32.8

-2

2.8

31.2

42.7

Minor BPS

55.7

0.16

1.6

64.35

40.4

Associated Gene:

Gene:

NCOA7

Ensembl Gene ID:

ENSAPLG00000002790

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002869

60588877 - 60654986

66110

ENSAPLT00000025921

60626085 - 60654986

28902