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Intron Name: Anas_platyrhynchos_platyrhynchos_3_60687634_60694780_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

60687634 - 60694780

Intron Length:

7147

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCTTG

5'SS Class:

strong_major

3'SS Sequence:

TGATGCCATGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

CTGCCATAAAAA

Flanking Amino Acid:

ITMEKVKEFKDQDQNSYLDD

Intron Amino Acid Position:

420

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.94

0.9

78.8

38.3

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

66.6

0.37

59.3

41.8

Minor 5ss

47.5

-0.2

2.8

64.1

47.4

Minor BPS

45.1

-0.3

55.2

43.2

Associated Gene:

Gene:

TRMT11

Ensembl Gene ID:

ENSAPLG00000002183

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002397

60670007 - 60694909

24903