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Intron Name: Anas_platyrhynchos_platyrhynchos_3_60813829_60817699_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

60813829 - 60817699

Intron Length:

3871

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGGGCG

5'SS Class:

major

3'SS Sequence:

TCTTCTTTTAAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

TTCTCCCTGATT

Flanking Amino Acid:

LRLAAGGDLLVHLNFLMFLH

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.6

0.6

59.2

39.7

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

80.3

0.68

81.7

27.6

Minor 5ss

24.2

-3

3.3

26.6

37.9

Minor BPS

66.9

0.61

1.7

83.85

37.3

Associated Gene:

Gene:

CENPW

Ensembl Gene ID:

ENSAPLG00000002178

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037072

60813736 - 60819486

5751

ENSAPLT00000002177

60813068 - 60819486

6419