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Intron Name: Anas_platyrhynchos_platyrhynchos_3_60817814_60819459_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

60817814 - 60819459

Intron Length:

1646

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATAAAG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAAATAT

U12 Branch Point Sequence:

TTTTTTTTTTTT

Flanking Amino Acid:

KPEHTIAAAKVILKRSRG*

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

73.5

37.1

Major BPS

59.7

0.24

1.1

55.7

39.9

Major PPT

1.1

0.4

13.8

Minor 5ss

32.9

-2

2.9

45.6

Minor BPS

43.9

-0.3

3.5

78.47

38.5

Associated Gene:

Gene:

CENPW

Ensembl Gene ID:

ENSAPLG00000002178

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037072

60813736 - 60819486

5751

ENSAPLT00000002177

60813068 - 60819486

6419