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Intron Name: Anas_platyrhynchos_platyrhynchos_3_60845868_60856113_R

Intron Information:

Intron Rank:

150222

Intron Class:

major

Intron Phase:

Intron Coordinates:

60845868 - 60856113

Intron Length:

10246

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAACT

5'SS Class:

strong_major

3'SS Sequence:

TTGGTTTTGGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

AACACTTTAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.92

0.8

83.3

27.9

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

75.6

0.58

1.1

72.9

42.2

Minor 5ss

30.7

-2.2

2.9

41.1

44.9

Minor BPS

65.5

0.56

1.3

72.07

39.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028406

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030656

60844735 - 60858295

13561