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Intron Name: Anas_platyrhynchos_platyrhynchos_3_60859543_60859649_R

Intron Information:

Intron Rank:

150221

Intron Class:

major

Intron Phase:

Intron Coordinates:

60859543 - 60859649

Intron Length:

107

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTGGGCTGT

5'SS Class:

major

3'SS Sequence:

TCCTTCTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAGTGAT

U12 Branch Point Sequence:

TACCTCTGAGCA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.5

0.6

65.8

42.7

Major BPS

64.7

0.36

1.2

55.1

42.1

Major PPT

85.3

0.79

0.7

80.4

24.9

Minor 5ss

38.7

-1.3

3.4

55.4

48.8

Minor BPS

48.5

-0.1

1.7

58.8

40.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028406

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042025

60856018 - 60859707

3690

ENSAPLT00000026948

60858362 - 60859707

1346