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Intron Name: Anas_platyrhynchos_platyrhynchos_3_61290124_61292067_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61290124 - 61292067

Intron Length:

1944

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGTTC

5'SS Class:

strong_major

3'SS Sequence:

CTTTGTGTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTAAA

U12 Branch Point Sequence:

ACGTGTTAAAGC

Flanking Amino Acid:

QGKERQKLPEISVPAKCSSG

Intron Amino Acid Position:

640

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.4

0.98

0.8

30.4

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

81.3

0.7

0.9

72.6

42.4

Minor 5ss

41.3

-1

3.3

58.3

46.6

Minor BPS

41.5

-0.6

2.2

47.21

43.1

Associated Gene:

Gene:

KIAA0408

Ensembl Gene ID:

ENSAPLG00000015660

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016320

61289950 - 61310364

20415

ENSAPLT00000016318

61289950 - 61303322

13373