Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_61294641_61294986_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61294641 - 61294986

Intron Length:

346

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTA|GTAAGTAAA

5'SS Class:

major

3'SS Sequence:

TATATTTACAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

CTTATATTAAAA

Flanking Amino Acid:

AKNYIGDLNVALKELARVSE

Intron Amino Acid Position:

160

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.8

0.7

78.7

29.8

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

62.8

0.29

1.1

63.9

40.7

Minor 5ss

36.9

-1.5

2.7

38.6

Minor BPS

53.2

0.1

1.8

66.3

39.7

Associated Gene:

Gene:

KIAA0408

Ensembl Gene ID:

ENSAPLG00000015660

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016318

61289950 - 61303322

13373

ENSAPLT00000016320

61289950 - 61310364

20415