Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_61310365_61311689_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61310365 - 61311689

Intron Length:

1325

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAG|GCTTGGCCA

5'SS Class:

major

3'SS Sequence:

TTTACTTTCCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTAAT

U12 Branch Point Sequence:

TTGTATTTACTT

Flanking Amino Acid:

FYLLRPTGKKMFQPIILLIL

Intron Amino Acid Position:

386

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.8

0.52

1.3

57.2

41.8

Major BPS

79.4

0.73

0.9

79.6

29.1

Major PPT

84.1

0.77

0.8

76.8

37.2

Minor 5ss

23.2

-3.1

3.8

31.3

42.4

Minor BPS

57.2

0.3

1.8

76.19

41.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015530

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016180

61310254 - 61312844

2591