Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_61451011_61451121_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61451011 - 61451121

Intron Length:

111

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCAGA

5'SS Class:

strong_major

3'SS Sequence:

CCCCTTTCACAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTCAT

U12 Branch Point Sequence:

ATTCCTTTACTT

Flanking Amino Acid:

IKLANLTIKQEGTFYECEDD

Intron Amino Acid Position:

133

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

0.9

74.1

38.4

Major BPS

77.2

0.67

1.2

79.6

35.6

Major PPT

60.4

0.23

34.5

Minor 5ss

33.3

-1.9

2.8

45.7

Minor BPS

63.8

0.51

1.6

79.48

36.9

Associated Gene:

Gene:

THEMIS

Ensembl Gene ID:

ENSAPLG00000015423

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033533

61389144 - 61476830

87687