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Intron Name: Anas_platyrhynchos_platyrhynchos_3_61508676_61510548_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61508676 - 61510548

Intron Length:

1873

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACGGCAG

5'SS Class:

major

3'SS Sequence:

CCTAATTTGGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

CTTTGCCTAATT

Flanking Amino Acid:

SRRINMVQTEEQYIFIHDAI

Intron Amino Acid Position:

1105

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.6

0.65

1.1

60.7

45.5

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

64.9

0.34

61.2

39.7

Minor 5ss

-2.4

3.4

37.7

47.1

Minor BPS

57.5

0.31

2.1

80.27

42.1

Associated Gene:

Gene:

PTPRK

Ensembl Gene ID:

ENSAPLG00000013431

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014135

61495177 - 61906870

411694

ENSAPLT00000040009

61495177 - 61906870

411694

ENSAPLT00000032740

61495177 - 61906870

411694

ENSAPLT00000025205

61495177 - 61906870

411694

ENSAPLT00000018538

61495177 - 61906870

411694