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Intron Name: Anas_platyrhynchos_platyrhynchos_3_61515192_61517808_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61515192 - 61517808

Intron Length:

2617

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGTACC

5'SS Class:

strong_major

3'SS Sequence:

ATTGCTGTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAGTAAT

U12 Branch Point Sequence:

TGATACTCAAAC

Flanking Amino Acid:

NYIDIWLYRDGYQRPSHYIA

Intron Amino Acid Position:

959

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

80.9

31.3

Major BPS

76.6

0.66

1.1

75.9

36.3

Major PPT

73.2

0.52

0.9

70.2

40.7

Minor 5ss

39.4

-1.2

2.7

51.9

37.5

Minor BPS

50.4

-0

1.8

63.51

40.8

Associated Gene:

Gene:

PTPRK

Ensembl Gene ID:

ENSAPLG00000013431

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018538

61495177 - 61906870

411694