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Intron Name: Anas_platyrhynchos_platyrhynchos_3_61518096_61519077_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61518096 - 61519077

Intron Length:

982

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTGAGTATC

5'SS Class:

strong_major

3'SS Sequence:

TTGGTTTTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCAAAA

U12 Branch Point Sequence:

GGCACCATAACC

Flanking Amino Acid:

TKNRYGNIIAYDHSRVILQP

Intron Amino Acid Position:

898

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

83.4

Major BPS

68.1

0.45

73.5

28.6

Major PPT

85.3

0.79

0.9

79.9

37.7

Minor 5ss

37.3

-1.4

2.9

50.4

39.3

Minor BPS

54.7

0.13

1.7

62.16

42.4

Associated Gene:

Gene:

PTPRK

Ensembl Gene ID:

ENSAPLG00000013431

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032740

61495177 - 61906870

411694

ENSAPLT00000025205

61495177 - 61906870

411694

ENSAPLT00000018538

61495177 - 61906870

411694

ENSAPLT00000014135

61495177 - 61906870

411694

ENSAPLT00000040009

61495177 - 61906870

411694