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Intron Name: Anas_platyrhynchos_platyrhynchos_3_61670146_61704809_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61670146 - 61704809

Intron Length:

34664

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAGTTT

5'SS Class:

strong_major

3'SS Sequence:

GTCTCCCATACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAGCAC

U12 Branch Point Sequence:

TTAGCACTGACT

Flanking Amino Acid:

VSNFAQLIVREPPRPIAPPQ

Intron Amino Acid Position:

253

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

81.9

32.1

Major BPS

53.4

0.08

1.4

65.7

Major PPT

72.5

0.51

0.9

65.6

35.2

Minor 5ss

-0.9

3.5

64.1

47.4

Minor BPS

0.01

2.1

74.27

42.2

Associated Gene:

Gene:

PTPRK

Ensembl Gene ID:

ENSAPLG00000013431

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032740

61495177 - 61906870

411694

ENSAPLT00000025205

61495177 - 61906870

411694

ENSAPLT00000018538

61495177 - 61906870

411694

ENSAPLT00000014135

61495177 - 61906870

411694

ENSAPLT00000040009

61495177 - 61906870

411694