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Intron Name: Anas_platyrhynchos_platyrhynchos_3_61959541_61984200_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

61959541 - 61984200

Intron Length:

24660

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACCTCT

5'SS Class:

weak_major

3'SS Sequence:

TTTTCCTCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTGTTAT

U12 Branch Point Sequence:

GTTGTGTTATCT

Flanking Amino Acid:

AAWNVTNAIQGIFVLGLPYA

Intron Amino Acid Position:

100

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.9

0.63

1.2

72.3

40.1

Major BPS

63.6

0.34

1.4

57.4

49.1

Major PPT

0.92

0.6

89.3

19.4

Minor 5ss

57.2

0.24

2.5

74.8

41.2

Minor BPS

47.6

-0.1

2.3

71.72

45.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013242

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013782

61958389 - 61986261

27873