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Intron Name: Anas_platyrhynchos_platyrhynchos_3_62164426_62166100_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

62164426 - 62166100

Intron Length:

1675

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTAAGTTGA

5'SS Class:

major

3'SS Sequence:

CTTTCTCTTTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTAAT

U12 Branch Point Sequence:

TCTTTGCTAATA

Flanking Amino Acid:

GTFLVKHECEPCNCHGKTEE

Intron Amino Acid Position:

289

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.8

0.68

1.3

38.1

Major BPS

79.3

0.73

1.1

77.9

34.9

Major PPT

86.3

0.82

0.6

85.1

22.4

Minor 5ss

40.9

-1

2.8

48.4

41.2

Minor BPS

48.5

-0.1

2.3

66.95

40.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011890

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045348

62110304 - 62327611

217308

ENSAPLT00000041524

62110286 - 62273607

163322

ENSAPLT00000034236

62110168 - 62277304

167137

ENSAPLT00000012467

62110304 - 62327611

217308

ENSAPLT00000047456

62110304 - 62327611

217308