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Intron Name: Anas_platyrhynchos_platyrhynchos_3_62166280_62167629_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

62166280 - 62167629

Intron Length:

1350

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAATGCA

5'SS Class:

major

3'SS Sequence:

TCTGTTTTTATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAGTAAT

U12 Branch Point Sequence:

TGTTTAGTAATA

Flanking Amino Acid:

CVDGYFRPKGVLPDSPDPCQ

Intron Amino Acid Position:

349

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.5

0.62

68.4

36.8

Major BPS

76.6

0.66

1.1

75.9

36.3

Major PPT

84.3

0.77

0.7

79.8

32.3

Minor 5ss

31.9

-2.1

3.2

32.7

42.2

Minor BPS

49.4

-0

2.2

68.66

37.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011890

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045348

62110304 - 62327611

217308

ENSAPLT00000034236

62110168 - 62277304

167137

ENSAPLT00000012467

62110304 - 62327611

217308

ENSAPLT00000047456

62110304 - 62327611

217308