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Intron Name: Anas_platyrhynchos_platyrhynchos_3_62230336_62234353_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

62230336 - 62234353

Intron Length:

4018

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTATC

5'SS Class:

strong_major

3'SS Sequence:

ATCTACCTTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACCTAAT

U12 Branch Point Sequence:

GTTTACCTAATG

Flanking Amino Acid:

PPGYDGTSCEYCWPQHRRVN

Intron Amino Acid Position:

700

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.2

1.04

0.7

90.4

20.6

Major BPS

73.1

0.57

71.9

31.3

Major PPT

77.3

0.61

0.9

70.1

35.5

Minor 5ss

34.8

-1.7

2.8

44.9

43.2

Minor BPS

55.6

0.04

1.9

66.27

41.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011890

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034236

62110168 - 62277304

167137

ENSAPLT00000047456

62110304 - 62327611

217308