Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_62234166_62234353_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

62234166 - 62234353

Intron Length:

188

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGCGCA

5'SS Class:

major

3'SS Sequence:

ATCTACCTTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACCTAAT

U12 Branch Point Sequence:

GTTTACCTAATG

Flanking Amino Acid:

SNLTPTNNAKYCWPQHRRVN

Intron Amino Acid Position:

687

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.9

0.56

1.3

40.2

Major BPS

73.1

0.57

71.9

31.3

Major PPT

77.3

0.61

0.9

70.1

35.5

Minor 5ss

-2.1

3.2

39.7

45.8

Minor BPS

55.6

0.04

1.9

66.27

41.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011890

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045348

62110304 - 62327611

217308

ENSAPLT00000012467

62110304 - 62327611

217308