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Intron Name: Anas_platyrhynchos_platyrhynchos_3_62258425_62262798_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

62258425 - 62262798

Intron Length:

4374

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTGAT

5'SS Class:

strong_major

3'SS Sequence:

TTCTTGGTGGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTAAT

U12 Branch Point Sequence:

CTTCCATGTACT

Flanking Amino Acid:

VIGRRCDMCKPETFGLQSSR

Intron Amino Acid Position:

903

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.01

0.7

86.6

22.3

Major BPS

86.7

0.91

0.7

84.2

21.8

Major PPT

71.9

0.49

1.1

68.5

42.1

Minor 5ss

28.9

-2.4

3.2

39.6

46.4

Minor BPS

47.9

-0

2.1

72.07

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011890

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034236

62110168 - 62277304

167137

ENSAPLT00000012467

62110304 - 62327611

217308