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Intron Name: Anas_platyrhynchos_platyrhynchos_3_62269973_62273430_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

62269973 - 62273430

Intron Length:

3458

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGACAA

5'SS Class:

strong_major

3'SS Sequence:

CTTTCTATTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

TTTTTCTGATTT

Flanking Amino Acid:

VDRTGQCNCKVNVEGVHCDR

Intron Amino Acid Position:

1101

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

67.8

39.3

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

85.6

0.8

77.6

35.4

Minor 5ss

29.9

-2.3

3.3

38.1

46.8

Minor BPS

0.52

1.7

84.31

36.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011890

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041524

62110286 - 62273607

163322

ENSAPLT00000034236

62110168 - 62277304

167137