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Intron Name: Anas_platyrhynchos_platyrhynchos_3_62270051_62275833_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

62270051 - 62275833

Intron Length:

5783

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTATTCTTA

5'SS Class:

weak_major

3'SS Sequence:

TGAACATGCATAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TTCTTTTGAACA

Flanking Amino Acid:

TPTFLGICTWVTLKPEQMIL

Intron Amino Acid Position:

1100

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.4

0.32

1.1

60.5

40.9

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

53.4

0.08

46.7

40.3

Minor 5ss

61.1

0.37

2.3

64.4

Minor BPS

67.6

0.55

1.4

75.34

36.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011890

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012467

62110304 - 62327611

217308

ENSAPLT00000047456

62110304 - 62327611

217308

ENSAPLT00000045348

62110304 - 62327611

217308