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Intron Name: Anas_platyrhynchos_platyrhynchos_3_62277301_62281983_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

62277301 - 62281983

Intron Length:

4683

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTCTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTTAC

U12 Branch Point Sequence:

TACTCCTCCACT

Flanking Amino Acid:

ATHGNIMRQSRISEISMEVA

Intron Amino Acid Position:

1289

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

1.1

81.8

38.5

Major BPS

78.8

0.71

0.9

69.7

37.1

Major PPT

98.2

1.08

0.5

92.3

26.6

Minor 5ss

45.7

-0.5

2.9

67.7

43.2

Minor BPS

58.2

0.34

77.44

44.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011890

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047456

62110304 - 62327611

217308

ENSAPLT00000045348

62110304 - 62327611

217308

ENSAPLT00000012467

62110304 - 62327611

217308