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Intron Name: Anas_platyrhynchos_platyrhynchos_3_62372402_62374915_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

62372402 - 62374915

Intron Length:

2514

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTAGTCTG

5'SS Class:

strong_major

3'SS Sequence:

CTCCTTTCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TACTCATACACT

Flanking Amino Acid:

VGLTKGCTLENIYTVSFPKP

Intron Amino Acid Position:

292

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

1.1

73.9

42.7

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

84.7

0.78

0.7

79.9

25.5

Minor 5ss

34.2

-1.8

2.8

41.7

44.8

Minor BPS

46.9

-0.1

2.3

70.02

46.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019398

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026531

62357400 - 62398952

41553

ENSAPLT00000034152

62357400 - 62398952

41553