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Intron Name: Anas_platyrhynchos_platyrhynchos_3_62386183_62388493_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

62386183 - 62388493

Intron Length:

2311

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTATCTTCC

5'SS Class:

weak_major

3'SS Sequence:

GTATGTTTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTATGAGCA

Flanking Amino Acid:

SITSAFDPMTDSCAADTEPA

Intron Amino Acid Position:

562

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.9

0.35

1.2

59.8

40.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

79.3

0.66

0.9

73.1

41.9

Minor 5ss

62.6

0.42

1.9

71.4

38.7

Minor BPS

52.6

0.08

1.9

73.43

37.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019398

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034152

62357400 - 62398952

41553