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Intron Name: Anas_platyrhynchos_platyrhynchos_3_62600460_62604944_F


Intron Information:

Intron Rank:
9

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
62600460 - 62604944

Intron Length:
4485

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTATTGTTT

5'SS Class:
major

3'SS Sequence:
GGTCATTATTTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
ATTTCAT

U12 Branch Point Sequence:
TATTTCATGACA

Flanking Amino Acid:
KTGHKLHPPKGYKEEEFSWP

Intron Amino Acid Position:
405

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
74.5
0.58
1
74.1
36.8

Major BPS
91.2
1.02
0.7
91.7
20.2

Major PPT
65.9
0.36
1
62.8
43.1

Minor 5ss
48.8
-0.1
3.1
73.2
43.6

Minor BPS
64.8
0.46
1.6
76.06
34.4

Associated Gene:

Gene:
L3MBTL3

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

62562629 - 62648277
85649

62562629 - 62648277
85649

62571714 - 62648730
77017