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Intron Name: Anas_platyrhynchos_platyrhynchos_3_62624173_62631902_F


Intron Information:

Intron Rank:
16

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
62624173 - 62631902

Intron Length:
7730

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TAG|GTATGTGCT

5'SS Class:
strong_major

3'SS Sequence:
CTTCTACTTCTAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CTATAAA

U12 Branch Point Sequence:
GTTTCTTCTACT

Flanking Amino Acid:
IKRARHIGHHSAVSCPYSEM

Intron Amino Acid Position:
650

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
88.4
0.91
0.8
80.6
31.9

Major BPS
66.3
0.4
1.1
68
34.4

Major PPT
78.5
0.64
0.8
70.3
35.3

Minor 5ss
41.4
-1
3.1
59
45.7

Minor BPS
60.4
0.41
1.9
81.29
40.1

Associated Gene:

Gene:
L3MBTL3

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

62571714 - 62648730
77017

62562629 - 62648277
85649

62562629 - 62648277
85649