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Intron Name: Anas_platyrhynchos_platyrhynchos_3_62652292_62652554_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

62652292 - 62652554

Intron Length:

263

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGAGAC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTGAA

U12 Branch Point Sequence:

ATCATTTGAAAT

Flanking Amino Acid:

SSLFAAVNEEVKVVTPVLEV

Intron Amino Acid Position:

426

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

69.5

35.6

Major BPS

78.4

0.71

0.9

69.4

37.7

Major PPT

95.8

1.03

0.5

96.6

11.7

Minor 5ss

29.3

-2.4

3.5

40.3

46.1

Minor BPS

0.01

1.5

64.77

39.6

Associated Gene:

Gene:

SAMD3

Ensembl Gene ID:

ENSAPLG00000011115

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011563

62651992 - 62687362

35371