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Intron Name: Anas_platyrhynchos_platyrhynchos_3_62674553_62682163_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

62674553 - 62682163

Intron Length:

7611

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTTCA

5'SS Class:

strong_major

3'SS Sequence:

TAATCTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATATAAT

U12 Branch Point Sequence:

TTCACAATAATA

Flanking Amino Acid:

GLIDQRVLKQKRNLRSCSAV

Intron Amino Acid Position:

126

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

80.5

27.6

Major BPS

0.72

78.4

31.2

Major PPT

83.6

0.76

0.8

81.2

35.8

Minor 5ss

42.2

-0.9

2.7

50.9

39.6

Minor BPS

49.8

-0

1.9

66.43

39.8

Associated Gene:

Gene:

SAMD3

Ensembl Gene ID:

ENSAPLG00000011115

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011563

62651992 - 62687362

35371

ENSAPLT00000029699

62666621 - 62687362

20742