Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_62952876_62954420_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

62952876 - 62954420

Intron Length:

1545

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAATGGT

5'SS Class:

strong_major

3'SS Sequence:

TCTTGCACCATAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAG

U12 Branch Point Sequence:

GTTTCTTGCACC

Flanking Amino Acid:

VAPEIICCSEPPVVKTEMVT

Intron Amino Acid Position:

758

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.86

0.9

78.6

35.9

Major BPS

72.4

0.56

1.5

71.4

45.1

Major PPT

68.6

0.42

0.8

62.4

33.3

Minor 5ss

33.8

-1.8

3.4

49.7

46.6

Minor BPS

56.7

0.19

1.9

71.92

39.2

Associated Gene:

Gene:

EPB41L2

Ensembl Gene ID:

ENSAPLG00000011001

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011481

62947922 - 63005493

57572