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Intron Name: Anas_platyrhynchos_platyrhynchos_3_63510008_63513408_F

Intron Information:

Intron Rank:

106835

Intron Class:

major

Intron Phase:

Intron Coordinates:

63510008 - 63513408

Intron Length:

3401

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAATGA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTCCTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

GTCTGCTTCACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.73

71.1

35.5

Major BPS

96.5

1.15

0.6

34.2

Major PPT

88.9

0.88

0.6

88.5

Minor 5ss

36.7

-1.5

3.1

47.8

47.6

Minor BPS

55.3

0.25

2.2

76.24

46.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014385

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034627

63431868 - 63563668

131801

ENSAPLT00000046304

63431945 - 63562661

130717

ENSAPLT00000027310

63431868 - 63562661

130794

ENSAPLT00000041410

63431945 - 63562661

130717

ENSAPLT00000025146

63431868 - 63562661

130794

ENSAPLT00000038027

63431868 - 63563668

131801

ENSAPLT00000015027

63431868 - 63562661

130794

ENSAPLT00000035262

63431945 - 63548563

116619