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Intron Name: Anas_platyrhynchos_platyrhynchos_3_63641265_63645928_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

63641265 - 63645928

Intron Length:

4664

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTTAA

5'SS Class:

strong_major

3'SS Sequence:

TATCCTCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

TCATCTAGAAAT

Flanking Amino Acid:

EKDLSPKSMKRSQSVVDPGV

Intron Amino Acid Position:

299

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

76.3

30.6

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

80.2

0.68

0.8

30.6

Minor 5ss

32.7

-2

3.1

39.4

46.5

Minor BPS

48.6

-0

1.8

68.16

42.1

Associated Gene:

Gene:

CLVS2

Ensembl Gene ID:

ENSAPLG00000014464

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015069

63641177 - 63690052

48876