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Intron Name: Anas_platyrhynchos_platyrhynchos_3_63646150_63649249_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

63646150 - 63649249

Intron Length:

3100

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTATTTTTC

5'SS Class:

weak_major

3'SS Sequence:

TATGCACATACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

TTGTTTTTACCT

Flanking Amino Acid:

PFLKEKTRKRIFLHGNNLNS

Intron Amino Acid Position:

226

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.7

0.46

1.1

67.7

38.4

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

67.3

0.39

59.2

40.9

Minor 5ss

51.8

0.06

2.3

61.5

43.5

Minor BPS

67.4

0.62

1.6

82.67

39.4

Associated Gene:

Gene:

CLVS2

Ensembl Gene ID:

ENSAPLG00000014464

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015069

63641177 - 63690052

48876

ENSAPLT00000047744

63642617 - 63690052

47436