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Intron Name: Anas_platyrhynchos_platyrhynchos_3_63649361_63680539_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

63649361 - 63680539

Intron Length:

31179

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGTTT

5'SS Class:

strong_major

3'SS Sequence:

TTGTGACATACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAC

U12 Branch Point Sequence:

TTTAACTTACAT

Flanking Amino Acid:

MLRLAIEGLQDSFPARFGGI

Intron Amino Acid Position:

189

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

81.4

Major BPS

80.9

0.77

0.8

81.7

25.4

Major PPT

0.45

62.8

42.6

Minor 5ss

42.7

-0.8

3.4

64.6

46.7

Minor BPS

55.2

0.24

79.39

Associated Gene:

Gene:

CLVS2

Ensembl Gene ID:

ENSAPLG00000014464

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015069

63641177 - 63690052

48876

ENSAPLT00000047744

63642617 - 63690052

47436