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Intron Name: Anas_platyrhynchos_platyrhynchos_3_63756827_63758047_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

63756827 - 63758047

Intron Length:

1221

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGGTA

5'SS Class:

strong_major

3'SS Sequence:

TCTAATTTCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTAAT

U12 Branch Point Sequence:

TTTTCTCTAATT

Flanking Amino Acid:

LEASSQKQEKVYIIGHVPVG

Intron Amino Acid Position:

251

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.2

0.97

0.8

82.2

30.9

Major BPS

82.2

0.8

0.9

81.6

Major PPT

74.9

0.56

0.8

73.2

36.8

Minor 5ss

32.8

-2

3.7

46.2

49.1

Minor BPS

0.86

1.6

92.5

29.7

Associated Gene:

Gene:

SMPDL3A

Ensembl Gene ID:

ENSAPLG00000014509

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041912

63753097 - 63771732

18636

ENSAPLT00000034645

63752935 - 63766669

13735

ENSAPLT00000015121

63753060 - 63766669

13610