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Intron Name: Anas_platyrhynchos_platyrhynchos_3_63760987_63763989_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

63760987 - 63763989

Intron Length:

3003

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAACAA

5'SS Class:

strong_major

3'SS Sequence:

TGCTGTCTCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GAATAAT

U12 Branch Point Sequence:

TGAATAATAAGA

Flanking Amino Acid:

ALGNHDYWPQDQLPVTTSEV

Intron Amino Acid Position:

159

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

70.2

35.7

Major BPS

62.3

0.31

1.3

64.3

39.7

Major PPT

74.7

0.56

0.9

68.1

37.6

Minor 5ss

30.6

-2.2

3.1

38.6

46.4

Minor BPS

41.6

-0.6

51.92

Associated Gene:

Gene:

SMPDL3A

Ensembl Gene ID:

ENSAPLG00000014509

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041912

63753097 - 63771732

18636

ENSAPLT00000034645

63752935 - 63766669

13735

ENSAPLT00000015121

63753060 - 63766669

13610