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Intron Name: Anas_platyrhynchos_platyrhynchos_3_63764874_63766554_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

63764874 - 63766554

Intron Length:

1681

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

TTTCTGTAAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

TTTTCTTTAATC

Flanking Amino Acid:

PAGPGPQSAVGQFWHVSDLH

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

68.4

38.7

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

73.6

0.53

39.4

Minor 5ss

26.1

-2.7

2.9

22.8

37.4

Minor BPS

87.5

1.16

0.8

90.01

23.7

Associated Gene:

Gene:

SMPDL3A

Ensembl Gene ID:

ENSAPLG00000014509

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034645

63752935 - 63766669

13735

ENSAPLT00000015121

63753060 - 63766669

13610