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Intron Name: Anas_platyrhynchos_platyrhynchos_3_63878320_63878721_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

63878320 - 63878721

Intron Length:

402

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTAGTTGT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCCTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGATAAT

U12 Branch Point Sequence:

GTTTTGGGAATT

Flanking Amino Acid:

QETQVFKPKSDKQLIQYTAF

Intron Amino Acid Position:

523

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.1

0.8

1.1

79.9

Major BPS

72.6

0.56

1.2

72.3

40.4

Major PPT

90.2

0.9

0.6

89.9

18.2

Minor 5ss

38.3

-1.3

2.8

50.9

45.4

Minor BPS

43.2

-0.4

2.6

68.72

42.7

Associated Gene:

Gene:

HSF2

Ensembl Gene ID:

ENSAPLG00000014710

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045440

63878030 - 63905104

27075

ENSAPLT00000030684

63878030 - 63891877

13848

ENSAPLT00000015375

63877571 - 63891877

14307