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Intron Name: Anas_platyrhynchos_platyrhynchos_3_63878807_63879420_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

63878807 - 63879420

Intron Length:

614

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTTTC

5'SS Class:

strong_major

3'SS Sequence:

CTTTGTTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTAGAT

U12 Branch Point Sequence:

TAGATTTTACTT

Flanking Amino Acid:

NPTDHITNTKMETKGIETTK

Intron Amino Acid Position:

495

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.5

0.88

0.9

85.1

25.6

Major BPS

79.2

0.72

Major PPT

88.1

0.86

0.8

80.3

37.3

Minor 5ss

46.5

-0.4

2.7

61.9

36.7

Minor BPS

49.8

0.06

1.6

64.67

40.7

Associated Gene:

Gene:

HSF2

Ensembl Gene ID:

ENSAPLG00000014710

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045440

63878030 - 63905104

27075

ENSAPLT00000015375

63877571 - 63891877

14307