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Intron Name: Anas_platyrhynchos_platyrhynchos_3_639781_642312_F

Intron Information:

Intron Rank:

138239

Intron Class:

major

Intron Phase:

Intron Coordinates:

639781 - 642312

Intron Length:

2532

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTATA

5'SS Class:

strong_major

3'SS Sequence:

ATATTTACTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

CTGTTTGTAATA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.2

0.97

0.8

88.9

24.9

Major BPS

84.4

0.85

1.1

34.5

Major PPT

73.3

0.52

0.9

68.1

37.9

Minor 5ss

39.5

-1.2

2.8

48.3

41.8

Minor BPS

49.4

-0

61.45

40.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024370

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040360

639778 - 642386

2609