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Intron Name: Anas_platyrhynchos_platyrhynchos_3_64004129_64004668_F

Intron Information:

Intron Rank:

130863

Intron Class:

major

Intron Phase:

Intron Coordinates:

64004129 - 64004668

Intron Length:

540

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATGAA

5'SS Class:

strong_major

3'SS Sequence:

CTCTTTTCTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGGTAAT

U12 Branch Point Sequence:

TCTTTTCTACAG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

27.6

Major BPS

69.2

0.48

1.3

69.7

44.2

Major PPT

88.1

0.86

0.7

83.3

25.3

Minor 5ss

31.4

-2.1

3.2

39.9

46.1

Minor BPS

44.2

-0.5

52.14

42.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020266

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026081

63990932 - 64005046

14115