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Intron Name: Anas_platyrhynchos_platyrhynchos_3_6453641_6455916_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6453641 - 6455916

Intron Length:

2276

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACCTCCC

5'SS Class:

major

3'SS Sequence:

CTTTCTTTTAAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTCAT

U12 Branch Point Sequence:

TTTCTTTTAAAG

Flanking Amino Acid:

LHLGEIRGLKDINQKLQEDN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.6

0.49

1.2

60.8

44.2

Major BPS

72.5

0.56

1.2

39.9

Major PPT

80.4

0.68

81.8

27.5

Minor 5ss

-1.1

54.6

42.5

Minor BPS

65.1

0.33

1.4

69.62

37.6

Associated Gene:

Gene:

CCDC85A

Ensembl Gene ID:

ENSAPLG00000001419

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047383

6381098 - 6456135

75038

ENSAPLT00000001415

6381098 - 6456135

75038