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Intron Name: Anas_platyrhynchos_platyrhynchos_3_64836161_64840665_R

Intron Information:

Intron Rank:

144889

Intron Class:

major

Intron Phase:

Intron Coordinates:

64836161 - 64840665

Intron Length:

4505

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGAGTAGA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTTGGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATCAA

U12 Branch Point Sequence:

CAATATTTACCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

0.9

76.9

33.7

Major BPS

0.72

80.3

31.7

Major PPT

82.3

0.73

0.9

81.4

30.6

Minor 5ss

31.4

-2.1

2.7

33.6

35.4

Minor BPS

50.2

0.08

1.8

66.7

43.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025339

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031791

64835909 - 64843502

7594