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Intron Name: Anas_platyrhynchos_platyrhynchos_3_65026710_65027297_R


Intron Information:

Intron Rank:
132776

Intron Class:
major

Intron Phase:

Intron Coordinates:
65026710 - 65027297

Intron Length:
588

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TAG|GTAGGTGAG

5'SS Class:
strong_major

3'SS Sequence:
ATGTTTCTATCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TATTTAC

U12 Branch Point Sequence:
TGTCCTTTGAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
84.9
0.82
1
72.3
39.5

Major BPS
78.8
0.71
0.9
69.7
37.1

Major PPT
76.1
0.59
1
75.2
39.1

Minor 5ss
30.6
-2.2
3.4
39.1
46.7

Minor BPS
64.3
0.53
1.4
78.75
37

Associated Gene:

Gene:

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

65012952 - 65033311
20360

65012952 - 65034624
21673